|
Gene/Marker
|
Descriptor
|
|
a1
|
Vertical arrangement of leaves (371)
|
|
Aadh >>> Adh
|
Aromatic alcohol dehydrogenase
|
|
Aat syn Got
|
Aspartat aminotransferase
|
|
AawR173-3 Petkus
|
Rye-specific PCR DNA primers
|
|
AawR173-3 King II
|
Rye-specific PCR DNA primers
|
|
Ac
|
Color of anthers
|
|
Acc240
|
Acetyl-CoA carboxylase (423)
|
|
Acl
|
Acyl carrier protein
|
|
Acl1.2 syn Xwayc4
|
|
|
Acl1.3 syn Xwayc2
|
|
|
Aco
|
Aconitase
|
|
Acp
|
Acid phosphatase
|
|
Acph >>> Acp
|
|
|
Adgp2 syn Xwye838
|
|
|
Adgp3 syn Xwye1858
|
|
|
alb
|
Albinism of seedling
|
|
Adh
|
Alcohol dehydrogenase
|
|
Adh syn Xcsd19
|
|
|
Adk
|
Adenylate kinase isomerase
|
|
Al
|
Length of anthers (358)
|
|
al syn el
|
Absent ligule
|
|
Almt142
|
Malate transporter gene likely responsible for aluminum tolerance (365,428,429)
|
|
Alp
|
Alkine phosphatase
|
|
alpha-Amy3 syn Xpsr14
|
|
|
Alt1-6RS
|
Tolerance to excess of aluminum (410)
|
|
Alt2-3RS
|
Tolerance to excess of aluminum, major locus (348,410,428);
secretion of organic acids malate and citrate are accociated with the presence of Alt2 (417)
|
|
Alt3-4RL
|
Tolerance to excess of aluminum (410,428)
|
|
Alt4-7RS53
|
Tolerance to excess of aluminum (409,410,428,448); encodes an aluminum-activated organic acid
transporter gene that could be utilized to increase Al tolerance in Al sensitive plant species
|
|
Amp syn Lap
|
Aminopeptidase
|
|
Amy...
|
amylase 30 (386)
|
|
an1 syn vi1
|
Anthocyaninless
|
|
an2
|
Anthocyaninless leaf base
|
|
An1
|
Anthocyanin (green seeds)
|
|
An1a
|
Anthocyanin (green seeds)
|
|
An1b
|
Anthocyanin (green seeds)
|
|
An3,4,6
|
Anthocyanin (purple seeds)
|
|
An5 syn R, R1
|
Anthocyanin (purple leaf base)
|
|
An7
|
Anthocyanin (purple leaf base)
|
|
Anu...
|
Antinutritive component
|
|
Apr >>> Xapr
|
|
|
APase
|
Root secretion of acid phosphatase (413)
|
|
asc...
|
Asynaptic chromosome pairing (343)
|
|
Asi >>> I(as) >>> Si
|
|
|
atp
|
Mitochondrial genes (321)
|
|
au
|
Aurea
|
|
AW15 >>> Xaw15
|
cDNA clone
|
|
Axc
|
Arabinoxylan content (381)
|
|
B... >>> Xb...
|
Primers (410)
|
|
BIII >>> I(a-BIII)
|
|
|
BCD... >>> Xbcd...
|
Primers (410)
|
|
Be syn firm
|
Brittle ear
|
|
bg
|
Brown glumes
|
|
beta-Glu1
|
beta-Glucosidase
|
|
bn
|
Bent lowest internode
|
|
br...
|
Brittle stem (101,335)
|
|
bs syn br
|
Branched stem (32)
|
|
br >>> bs
|
|
|
Bt
|
Tolerance to excess of boron
|
|
Byd
|
Tolerance to barley yellow dwarf virus
|
|
Cat
|
Catalase
|
|
Cat syn Xpsr484
|
|
|
cb
|
Brown stem
|
|
Cbt
|
Resistance to karnal bunt (Neovossia indica)
|
|
Ce
|
Copper efficiency
|
|
centr
|
Centromere
|
|
Chl
|
Chlorophyll deficiency
|
|
Cl
|
Shorter coleoptile length (426); coleoptile length seems to be partially dominant to long coleoptile; no correlation between seed weight and coleoptile length exists
|
|
cl >>> lu
|
|
|
Clr1 >>> Ner
|
Hybrid chlorosis in wheat-rye hybrids (444)
|
|
Cm
|
Chlorofom-methanol proteins
|
|
Cm16 syn Xmtd862
|
|
|
Cnr syn Cre
|
Resistance to cereal cyst nematode (Heterodera avenae)
|
|
Co
|
Corroded
|
|
cob
|
A mitochondrial gene responsible for an abnormal transcript causing male-sterile cytoplasm in rye (Pampa type) (339)
|
|
Cxp1 syn Xwia483
|
|
|
Cre >>> Cnr
|
|
|
CreR >>> Cnr and Cre
|
|
|
cs
|
Shortened stamens and coalesced (374)
|
|
ct55...
|
Short straw mutants
|
|
ct255
|
Short straw mutant (compact spike)
|
|
ct355
|
Compactum growth habit
|
|
CTer
|
Terminal DNA sequence
|
|
Cut
|
Tolerance to excess of copper
|
|
Cxp
|
Carboxypeptidase
|
|
Cxp3 syn Xpsr8
|
|
|
Ddw55... syn Dw55...
|
Dominant dwarfness 55
|
|
de
|
Downward directed spikes (377)
|
|
De syn N
|
Dark ear
|
|
Dec
|
Dietary fibers content (381)
|
|
Dia33
|
Diaphorase
|
|
Dn7 syn Dnr syn Gbr
|
Resistance to the Russian wheat aphid (310)
|
|
Dnr syn Gbr
|
Resistance to (green bug) aphid (Diuraphis noxia)
|
|
dr syn sr
|
Secondary root system defective
|
|
drr
|
Resistance to drought
|
|
ds155
|
Recessive dwarfness (382)
|
|
dsc...
|
Desynaptic chromosome pairing (343)
|
|
dw55
|
Dwarf plant
|
|
dw855 syn Dw21,55
|
Dwarf plant, recessive
|
|
Dw155 syn Ddw155 syn Hl55
|
(371)
|
|
Ec
|
Color of spike
|
|
eh
|
Early heading
|
|
el >>> al
|
Eligulatum
|
|
Embp syn Xrsq805
|
|
|
Embp1 syn Xrsq805
|
|
|
Embp2 syn Xrsq805
|
|
|
Eml-1Rb48
|
Embryo lethality in wheat-rye hybrids (364,440,441,442)
|
|
En(ae)
|
Enhancer of androgenous embryoids wheat-rye substitutions in vitro (384)
|
|
En(ai)
|
Enhancer of albino induction in anther culture
|
|
En(gi)
|
Enhancer of genome instability of wheat (383)
|
|
En(hi)
|
Enhancer of anther culture ability and haploid induction
|
|
En(cg)
|
Enhancer of callus growth in vitro
|
|
En(edu)17
|
Enhancer of equational division of univalents
|
|
En(em)
|
Enhancer of embryogenesis in vitro
|
|
Ep...
|
Endopeptidase
|
|
epr >>> wa
|
|
|
epr1 >>> wa1
|
|
|
Er...
|
Early ripening
|
|
es >>> wg
|
|
|
Est43...
|
Esterase
|
|
Fa
|
Flag leaf area
|
|
Fbp syn Xpsr39
|
|
|
firm >>> Be
|
|
|
Fl
|
Length of flag leaf
|
|
Fr
|
Resistance to Fusarium ssp.
|
|
fs
|
Fine stripe
|
|
fv
|
Flavovirescent
|
|
Fw
|
Width of flag leaf
|
|
(GACA)4
|
Oligomer with tetranucleotide motif after FISH (281); in the karyogram given as red dots
|
|
Gai
|
Gibberellic acid insensitivity
|
|
Gal
|
Galactosidase
|
|
Gbr >>> Dnr
|
|
|
Gbs
|
Primer derived from granule-bound starch synthetase (GBSSI), also known as waxy) gene (363) (455)
|
|
gd55 syn mn55
|
Grass dwarfness
|
|
Ger147
|
Gene encodes a bifunctional 3,5-epimerase-4-reductase in L-fucose synthesis
|
|
Gdh
|
Glutamate dehydrogenase
|
|
Glb3 syn Xwia807
|
|
|
Gli
|
Gliadin >>> Secalin
|
|
Gli-R1 >>> Sec1
|
|
|
Gli-R3 >>> Sec4
|
|
|
Glob syn Xrsq808
|
|
|
GloB
|
Three-beta-globin
|
|
Glu...
|
Glutenin >>> Secalin
|
|
Glu-R1 >>> Sec3
|
|
|
Glu syn Glu1
|
|
|
Glu1 >>> Glu
|
|
|
Glu3 syn Xpsr11 >>> Sec3
|
|
|
Got syn Aat
|
Aspartat aminotransferase
|
|
Gpd
|
Glucose-6-phosphatase dehydrogenase
|
|
Gpi syn Pgi
|
Glucose phosphate isomerase
|
|
gr
|
Grassy plant habit
|
|
H syn Hfr
|
Resistance to Hessian fly (Mayetiola destructor)
|
|
H155 syn Dw155
|
Dominant short-straw mutant (371)
|
|
Ha syn Hp syn Hs35
|
Hairy leaf sheath/peduncle
|
|
HemA
|
HemA-gene encodes glutamyl-tRNA reductase
|
|
Hfr >>> H
|
|
|
Hg syn V
|
Hairy glume
|
|
Hl55 syn Dw155 syn Ddw155
|
251
|
|
Hm138
|
Resistance to lethal leaf blight and ear mold disease caused by Cochliobolus carbonum, race 1 (CCR1); common in all grasses;
detected in maize and barley (421)
|
|
Hma
|
3-hydroxymugineic acid synthetase
|
|
Hp >>> Hs >>> Ha35
|
|
|
Hs >>> Ha and Hp35
|
Hairy leaf sheath
|
|
Hsp17.3 syn Xttu1935
|
|
|
Hsps >>> I(hsps)
|
|
|
Ia >>> I(a)
|
|
|
I(a...)
|
alpha-amylase inhibitor (299)
|
|
I(a-BIII)
|
alpha-amylase inhibitor gene containing 354 nucleotides that encode amino acids (341)
|
|
I(Amy) >>> I(a)
|
Amylase inhibitor
|
|
I(as) syn Si syn Asi syn Isa
|
alpha-amylase/subtilisin inhibitor (299)
|
|
I(ae)
|
Inhibitor of androgenous embryoids wheat-rye substitutions in vitro (384)
|
|
I(hsps)
|
Suppressor effect on accumulation of HSP18 and HSP70 transcripts
|
|
I(et)
|
Major endosperm trypsin inhibitor
|
|
Ibf
|
Iodine binding factor
|
|
I(dha)
|
Inhibitor of insect alpha-amylase (RDAI)
|
|
I(dsc1)15
|
Dominant inhibitor suppressing desynaptic chromosome pairing (343)
|
|
I(ncw)
|
Inhibitor of novel cell wall formation in wheat (396)
|
|
I(scx)37
|
Secale cereale xylanase inhibitor (411)
|
|
Il
|
Internode length
|
|
Isa syn I(as)
|
|
|
Kn
|
Number of seeds per spike (361)
|
|
Kw..., kw...
|
Thousand-kernel weight (336)
|
|
Lec syn Xmsu488
|
|
|
ln
|
Light nodes (351)
|
|
Ln
|
Length of second internode
|
|
Iph >>> Per >>> Prx
|
|
|
La
|
Anthocyanin in ligule
|
|
la
|
Leafy awn (378)
|
|
Lap >>> Amp
|
|
|
Lc
|
Color of leaf
|
|
Ldh
|
Lactate dehydrogenase
|
|
lg
|
Light-green leaf color
|
|
ln
|
Light node
|
|
Ln
|
Number of leaves of stem
|
|
lo
|
Onion-like leaves (379)
|
|
Lr136 - Lr syn Pr1
|
Resistance to leaf (brown) rust (Puccinia recondita, P. dispersa) 6RL (380, 399, 400)
|
|
Lr-a
|
Resistance to leaf rust (Puccinia recondita) 1R
|
|
Lr-c
|
Resistance to leaf rust (Puccinia recondita) 1R
|
|
Lr-g
|
Resistance to leaf rust (Puccinia recondita)
|
|
Lra(7)
|
Resistance to leaf rust (Puccinia recondita), isolate 7 (350)
|
|
Lra(12)
|
Resistance to leaf rust (Puccinia recondita), isolate 12 (350)
|
|
Lra(25)
|
Resistance to leaf rust (Puccinia recondita), isolate25 (350)
|
|
Lra(81)
|
Resistance to leaf rust (Puccinia recondita), isolate 81 (350)
|
|
Lra(108)
|
Resistance to leaf rust (Puccinia recondita), isolate 108 (350)
|
|
lu syn cl
|
Lutescent
|
|
Lw
|
Leaf waxiness
|
|
Lys
|
Lysine
|
|
Mal
|
Malic enzyme
|
|
Mas
|
Mugineic acid synthetase
|
|
mc
|
Monoculm growth habit (374)
|
|
Mdh
|
Malate dehydrogenase
|
|
Me
|
Manganese efficiency
|
|
mn55 >>> gd55
|
Multinodosum, dwarf habit55
|
|
mn255
|
Dwarfness with double increased number of internodes (376)
|
|
mo50
|
Monstrous growth habit (446); showing additional spikelets per spike
|
|
mp
|
Multiple pistils
|
|
mrs1 >>> mo1>>> mo
|
(446)
|
|
ms
|
Male sterility (368)
|
|
msh syn Xc, Xs, Xr
|
mismatch repair gene homologs msh2 syn Xc11; msh3 syn Xs2; msh6 syn Xr2 (456)
|
|
mu1 >>> mo
|
Multiflowered spike (371,446)
|
|
N >>> De
|
|
|
Nar
|
Nitrate reductase
|
|
Nc
|
Color of nodes
|
|
Nca
|
Neocentric activity
|
|
Ndh
|
NADH dehydrogenase
|
|
Ner
|
Hybrid necrosis (124,443)
|
|
Ngc
|
Non-cellulosic glucose content
|
|
Nl
|
Neck length
|
|
Nor
|
Nucleolar organizer region
|
|
np55
|
Nana prostratum, short-stem ‘inch-gitl’
|
|
ol
|
Onion accrected leaves
|
|
or
|
Orange
|
|
pAWRC.1
|
3.4 kbp repetitive segment of retrotransposon-like elements (419,420) localized within the centromere of rye chromosomes without FISH signal in wheat chromosomes
|
|
P(cp) >>> En(cp)
|
Homoeologous pairing promoter
|
|
Pc
|
Purple culm
|
|
pe
|
Perennial growth habit
|
|
P(Edu) >>> En(edu)
|
Promoter of equational division of univalents
|
|
Per syn Prx
|
Peroxidase
|
|
Per syn Xpsr833
|
|
|
Pdk1 syn Xhhu1
|
|
|
pfs
|
Partial floret sterility
|
|
Pgd
|
6-phosphogluconate dehydrogenase
|
|
Pgi >>> Gpi
|
|
|
Pgm
|
Phosphoglucomutase
|
|
Pgt
|
Parthenogenesis induction
|
|
Ph >>> QTL3-5RL
|
Plant height
|
|
Pi
|
Tolerance to inorganic orthophosphate (Pi) starvation stress (413)
|
|
Pl >>> QTL4-5RL
|
Peduncle length
|
|
Pm
|
Resistance to powdery mildew
|
|
pol-r
|
Mitochondrial gene (323)
|
|
Pr3, Pr4, Pr5
|
Dominant resistance to Puccinia recondita f. sp. secalis (307)
|
|
Pr3 >>> Sec4
|
55-kD-seed protein
|
|
Pro
|
Proline
|
|
Prx >>> Per
|
Peroxidase
|
|
Ps syn Vs
|
Purple seeds
|
|
psbD
|
Coding for components of the reaction center of photosystem II and D2 protein
|
|
psbI
|
Coding for a polypeptide
|
|
pSc34 >>> Xpsc34
|
350-480 bp family from S. cereale
|
|
pSc74 >>> Xpsc74
|
610 bp family from S. cereale
|
|
pSc119.2 >>> Xpsc119.2
|
120 bp family from S. cereale
|
|
pSc200 >>> Xpsc200
|
Highly repetitive sequence from S. cereale
|
|
pScJNK1 >>> XpscJNK1
|
Novel highly repetitive sequence from S. cereale (402)
|
|
pScT7 >>> Xpsc77
|
5S rDNA form S. cereale
|
|
PSR154
|
cDNA clone, by HindIII
|
|
pTa71
|
25S-5.8S-18S rDNA from T. aestivum
|
|
Pur-R1 >>> Xpur-R1
|
|
|
Py
|
Yield per plant (361)
|
|
q
|
Speltoid spike
|
|
QTL1-2RL, 5RL, 7R
|
Flowering time, days after sowing (292,302)
|
|
QTL2-2R
|
Number of spikes per plant (292,302)
|
|
QTL3-5RL2.3
|
Plant height of main tillers (292,302)
|
|
QTL4-5RL2.3
|
Peduncle length of main tillers (292,302)
|
|
QTL5-6R
|
Number of florets per spike of main tillers (292,302,361)
|
|
QTL6-2R
|
Number of grains per spike of main tillers (292,302,361)
|
|
QTL7-2R, 5RL
|
Spike yield of main tillers (302,361)
|
|
QTL8-2R
|
Thousand grain weight (302)
|
|
QTL9-5RL, 6RL
|
Straw yield (302)
|
|
QTL10-4RL
|
Rfclb restorer CMS (311)
|
|
QTL11-6RS
|
Rfc2 restorer CMS (311)
|
|
QTL12-2R, 4R
|
Drought tolerance (338)
|
|
QTL13-1RS13
|
Number of seeds per spikelet (in wheat)
|
|
QTL14-1RL16
|
QChc.uas-1R.1,Chc1, Chlorophyll content in leaves (346,404)
|
|
QTL15-3RS16
|
QChc.uas-3R.1, Chc2, Chlorophyll content in leaves (346,404)
|
|
QTL16-4RL16
|
QChc.uas-4R.1,Chc3, Chlorophyll content in leaves (346,404)
|
|
QTL17-5RL16
|
QChc.uas-5R.1, Chc4, Chlorophyll content in leaves (346,404)
|
|
QTL18-5RL16
|
QGar.uas-5R.1, Gar1, Sensitivity of seedlings to gibberellic acid (346,404)
|
|
QTL19-1RL16
|
QGar.uas-1R.1, Gar2, Sensitivity of seedlings to gibberellic acid (346,404)
|
|
QTL20-7RL16
|
QGar.uas-7R.1, Gar3, Sensitivity of seedlings to gibberellic acid (346,404)
|
|
QTL21-1RS16
|
QAbr.uas-1R.1, Abr1, Sensitivity of seedlings to abscisic acids (346,404)
|
|
QTL22-2RS16
|
QAbr.uas-2R.1, Abr2, Sensitivity of seedlings to abscisic acids (346,404)
|
|
QTL23-5RL16
|
QAbr.uas-5R.1, Abr3, Sensitivity of seedlings to abscisic acids (346,404)
|
|
QTL24-1RS16
|
QAmy.uas-1R.1, Amy1-1, Activity of alpha-amylase (404,407,430)
|
|
QTL65-1RS16
|
QAmy.uas-1R.2, Amy , Activity of alpha-amylase; marker intervals Xiag95–Xapr1.5, Xubp19–Xem1.27 (430)
|
|
QTL88-1RL16
|
QAmy.uas-1R.1, Amy , Activity of alpha-amylase; marker interval Xapr1.1–Xbcd442 (430)
|
|
QTL66-1RL16
|
QAmy.uas-1R.3, Amy , Activity of alpha-amylase; marker interval Xapr1.12–Xapr1.11 (430)
|
|
QTL25-2RS16
|
QAmy.uas-2R.1, Amy2, Activity of alpha-amylase (404,407)
|
|
QTL67-2RS16
|
QAmy.uas-2R.2, Amy , Activity of alpha-amylase, marker intervals Xapr2.24–Xapr2.22, Xpsr900–Xem2.10 (430)
|
|
QTL75-2RL16
|
QAmy.uas-2R.3, Amy , Activity of alpha-amylase, marker interval Xapr2.12–Xpsr901 (430)
|
|
QTL26-3RS16
|
QAmy.uas-3R.1, Amy3, Activity of alpha-amylase (404,407)
|
|
QTL68-3RS16
|
QAmy.uas-3R.2, Amy , Activity of alpha-amylase, marker interval Xapr3.14–Xapr3.16 (430)
|
|
QTL76-3RL16
|
QAmy.uas-3R.1, Amy , Activity of alpha-amylase; marker interval Xubp20–Xapr3.3 (430)
|
|
QTL27-3RL16
|
QAmy.uas-3R.2, Amy4, Activity of alpha-amylase (404,407)
|
|
QTL69-4RS16
|
QAmy.uas-4R.2, Amy , Activity of alpha-amylase, marker interval Xapr4.15–Xapr4.16 (430)
|
|
QTL70-4RL16
|
QAmy.uas-4R.1, Amy , Activity of alpha-amylase; marker interval Xapr4.25–Xapr4.26 (430)
|
|
QTL77-4RL16
|
QAmy.uas-4R.3, Amy , Activity of alpha-amylase; marker interval Xpsr167–Xpsr899 (430)
|
|
QTL28-5RS16
|
QAmy.uas-5R.1, Amy5, Activity of alpha-amylase, (404,407)
|
|
QTL71-5RS16
|
QAmy.uas-5R.2, Amy , Activity of alpha-amylase; marker intervals Xapr5.13–Xapr5.14, Xpsr1327–Xubp3 (430)
|
|
QTL87-5RL16
|
QAmy.uas-5R.1, Amy , Activity of alpha-amylase, marker interval Xapr5.2–alpha-Amy3, Xapr5.2–alpha-Amy3 (430)
|
|
QTL29-5RL16
|
QAmy.uas-5R.2, Amy6, Activity of alpha-amylase (404,407)
|
|
QTL72-5RL16
|
QAmy.uas-5R.3, Amy , Activity of alpha-amylase; marker interval Xapr5.24–Xapr5.2 (430)
|
|
QTL78-6RS16
|
QAmy.uas-6R.2, Amy , Activity of alpha-amylase; marker interval Xpsr106-1–Xem6.11 (430)
|
|
QTL30-6RL16
|
QAmy.uas-6R.1, Amy7 , Activity of alpha-amylase; marker interval XScm46–Xapr6.7 (404,407,430)
|
|
QTL73-6RL16
|
QAmy.uas-6R.1, Amy , Activity of alpha-amylase; marker interal Est5–Xpsr454 (430)
|
|
QTL74-7RS16
|
QAmy.uas-7R.2, Amy , Activity of alpha-amylase; marker interval Xopq4a–Xapr7.25 (430)
|
|
QTL31-7RL16
|
QAmy.uas-7R.1, Amy8 Activity of alpha-amylase (404,407)
|
|
QTL32-7RL16
|
QAmy.uas-7R.2, Amy9 Activity of alpha-amylase (404,407)
|
|
QTL33-3RL
|
QHt.uas-3R.1, Ht1, Plant height (404,405)
|
|
QTL34-5RL
|
QHt.uas-5R.1, Ht2, Plant height (404,405)
|
|
QTL35-5RL
|
QSl.uas-5R.1, Sl1,Spike length (404,405)
|
|
QTL36-2RL
|
QTgw.uas-2R.1,Tgw1, Thousand grain weight (404,405)
|
|
QTL37-3RL
|
QTgw.uas-3R.1,Tgw2, Thousand grain weight (404,405)
|
|
QTL38-5RL
|
QTgw.uas-5R.1,Tgw3, Thousand grain weight (404,405)
|
|
QTL39-2RS
|
QKl.uas-2R.1,Kl1, Kernel length (404,405)
|
|
QTL40-3RL
|
QKl.uas-3R.1,Kl1, Kernel length (404,405)
|
|
QTL41-5RL
|
QKl.uas-5R.1,Kl2, Kernel length (404,405)
|
|
QTL42-1RS
|
QKt.uas-1R.1,Kt1, Kernel thickness (404,405)
|
|
QTL43-2RL
|
QKt.uas-2R.1,Kt2, Kernel thickness (404,405)
|
|
QTL44-3RL
|
QKt.uas-3R.1,Kt3, Kernel thickness (404,405)
|
|
QTL45-4RS
|
QKt.uas-4R.1,Kt4, Kernel thickness (404,405)
|
|
QTL46-5RL
|
QKt.uas-5R.1,Kt5, Kernel thickness (404,405)
|
|
QTL47-4RS
|
QHd.uas-4R.1,Hd1, Heading time (404,408)
|
|
QTL48-5RL
|
QHd.uas-5R.1,Hd2, Heading time (404,408)
|
|
QTL49-2RL
|
QFl.uas-2R.1,Fl1, Length of flag leaf (404)
|
|
QTL50-4RL
|
QFl.uas-4R.1,Fl2, Length of flag leaf (404)
|
|
QTL51-3RL
|
QSinl.uas-3R.1,Sinl1, Length of flag leaf (404)
|
|
QTL52-5RL
|
QSinl.uas-5R.1,Sinl2, Length of flag leaf (404)
|
|
QTL53-5RS
|
QSint.uas-5R.1,Sint1, Thickness of 2nd internode (404)
|
|
QTL54-7RL
|
QSint.uas-7R.1,Sint2, Thickness of 2nd internode (404)
|
|
QTL55-2RS
|
QKns.uas-2R.1,Kns1, Number of kernels per spike (404)
|
|
QTL56-3RL
|
QKns.uas-3R.1,Kns2, Number of kernels per spike (404)
|
|
QTL57-5RL
|
QKns.uas-3R.1,Kns3, Number of kernels per spike (404)
|
|
QTL58-3RS
|
QVisc.uas-3R.1,Visc1, Number of kernels per spike (404,406)
|
|
QTL59-3RS
|
QVisc.uas-3R.2,Visc2, Number of kernels per spike (404,406)
|
|
QTL79-1RS16
|
QPhs.uas-1R.2; Preharvest sprouting; marker interval Xapr1.5–Xapr1.22, Xem1.20–Xem1.27 (430)
|
|
QTL60-1RL16
|
QPhs.uas-1R.1; Preharvest sprouting; Ot1-3, additive gene action; marker interval Xapr1.18–Xapr1.17 (416,430)
|
|
QTL61-2RL16
|
QPhs.uas-2R.1; Preharvest sprouting; Ot1-3, dominant gene action; marker interval Xapr2.15–Xapr2.20 (416,430)
|
|
QTL85-2RL16
|
QPhs.uas-2R.3; Preharvest sprouting; marker interval Xapr2.12–Xpsr901 (430)
|
|
QTL80-3RS16
|
QPhs.uas-3R.2; Preharvest sprouting; marker interval Xapr3.14–Xapr3.16 (430)
|
|
QTL81-4RL16
|
QPhs.uas-4R.1; Preharvest sprouting; marker interval Xapr4.25–Xapr4.26 (430)
|
|
QTL82-5RS16
|
QPhs.uas-5R.2; Preharvest sprouting; marker interval Xapr5.13–Xapr5.14 (430)
|
|
QTL86-5RL16
|
QPhs.uas-5R.3; Preharvest sprouting, marker interval Xmtd862–Dw155 (430)
|
|
QTL62-5RL16
|
QPhs.uas-5R.1; Preharvest sprouting; Ot1-3, dominant gene action; marker intervals alpha-Amy3–Xis5.1, Xapr5.2–alpha-Amy3 (416,430)
|
|
QTL83-6RS16
|
QPhs.uas-6R.2; Preharvest sprouting; marker interval Xpsr106-1–XScm112 (430)
|
|
QTL63-6RL16
|
QPhs.uas-6R.1; Preharvest sprouting; Ot1-3, dominant gene action; marker interval XScm78–Xapr6.7, Xpsr454–XksuD2 (416,430)
|
|
QTL84-7RS16
|
QPhs.uas-7R.2; Preharvest sprouting; marker interval Xopq4a–Xapr7.25 (430)
|
|
QTL64-7RL16
|
QPhs.uas-7R.1; Preharvest sprouting; Ot1-3, recessive gene action; marker interval Xapr7.30–Xapr7.31 (416,430)
|
|
QTL89-1RS
|
Rooting ability, the terminal 15% of the rye 1RS arm carries gene(s) for greater rooting ability in wheat (447)
|
|
R, R1 >>> An5
|
|
|
rd
|
Reed growth habit
|
|
re
|
Reduced ear (361)
|
|
Reg
|
Red grain
|
|
REV139
|
Revolver; a transposon-like gene; consists of
2929-3041 bp with an inverted repeated sequence on each end and is dispersed through all seven chromosomes (422)
|
|
Rf syn Rfc
|
Male fertility restorer
|
|
Rfc >>> Rf
|
Male fertility restorer of the Pampa cytoplasm
|
|
Rfg
|
Male fertility restorer of the Guelzow cytoplasm
|
|
Rfp1
|
Male fertility restorer from Iranian primitive population (313,403)
|
|
Rfp2
|
Male fertility restorer from Argentinean landrace (313,403)
|
|
Rga51
|
Enhanced root growth ability in wheat (447)
|
|
rlt141241
|
cDNA clone from rye “Puma” highest expressed in root tissue conferring information for cold tolerance (424)
|
|
rlt142141
|
cDNA clone from rye “Puma” highest expressed in leaf tissue conferring information for cold tolerance (424)
|
|
Rm
|
Rye mildew
|
|
RNAse
|
RNAse
|
|
Rog
|
Round grain
|
|
rps
|
Mitochondrial genes (322), encoding the mitochondrial 18S ribosomal RNA
|
|
rps19
|
5'-truncated mitochondrial pseudogene co-transcribed with a downstream nad4L gene (340)
|
|
rr
|
Red rachis
|
|
rrn
|
Gene encoding the mitochondrial 18S ribosomal RNA
|
|
rs
|
Reduced seed set
|
|
RYS1
|
A mobile element activated during tissue culture; a foldback (FB) transposon first described in rye and also the first active
plant FB transposon reported
|
|
S1 >>> a1
|
Vertical arrangement of leaves (371)
|
|
S syn Z
|
Self-incompatility (353)
|
|
S5 syn Sf5
|
Self-incompatibility
|
|
Sbp syn Xpsr804
|
|
|
Sc
|
Color of spike
|
|
SCXI >>> I(scx)
|
|
|
Sdf
|
Soluble dietary fiber content
|
|
Sec...
|
Secalin
|
|
Sec1
|
40-55 kDa ω-secalin showing 15 copies of the gene (354)
|
|
Sec1a >>> Sec1
|
|
|
Sec1b >>> Sec1
|
|
|
Sec234
|
40-75 kDa gamma-secalin
|
|
Sec3
|
|
|
Sec3a >>> Sec3
|
|
|
Sec3b >>> Sec3
|
|
|
Sec4 syn Gli-R3 syn Pr
|
|
|
Sec5
|
40-75 kDa gamma-secalin
|
|
Sf
|
Self-fertility
|
|
Si >>> Asi >>> I(as)
|
|
|
Skd
|
Shikimate dehydrogenase
|
|
sl
|
Plants without spikes and spikelets (372,373)
|
|
Sl
|
Length of spike (361)
|
|
sl syn sp
|
Spreading leaf
|
|
Sn
|
Number of spikelets per spike (361)
|
|
Sod
|
Superoxide dismutase
|
|
sp >>> sl
|
|
|
Sp syn Sp1 syn Vrn
|
Spring growth habit (361,362,438)
|
|
Spf >>> QTL13-1RS13
|
Spikelet fertility (207,361)
|
|
Sr
|
Resistance to stem rust (Puccinia graminis) (380)
|
|
Sr31
|
Resistance to stem rust (Puccinia graminis f. sp. tritici) in 1AL.1RS translocated wheat ‘Amigo’ = ‘Insave’ rye (389)
|
|
sr >>> dr
|
|
|
ss1 syn Xpsr490
|
|
|
Ss2 syn Xpsr489
|
|
|
SsI(Ta)
|
Soluble starch synthetase I transporter gene (SSI) (363)
|
|
Ssp...12
|
Salt-soluble protein (299)
|
|
Su(cp)
|
Homoeologous pairing suppressor
|
|
Su(hsp)
|
Suppressor of heat shock proteins of wheat
|
|
Sut(Ta)
|
Sucrose transporter gene wheat, homoeologous group 4
|
|
Sw
|
Stem waxiness
|
|
sy >>> syn
|
|
|
sy1 = syn1 = asc115
|
(182,343,359)
|
|
sy2 = dsc115
|
|
|
sy3 = asc415
|
Weak asynaptic mutant (345)
|
|
sy2a = dsc215
|
|
|
sy2b = dsc315
|
|
|
sy6
|
Causing nonhomologous synapsis (345)
|
|
sy7
|
Causing nonhomologous synapsis (345)
|
|
sy8
|
Causing nonhomologous synapsis (345)
|
|
sy9 = asc215
|
|
|
sy19 = asc315,32
|
Causing nonhomologous synapsis (345,359)
|
|
syn >>> asc or dsc
|
|
|
T
|
Self-incompatility (353)
|
|
Ta(Almt1)42
|
Aluminum-activated malate transporter renamed by the authors from TaALMT1; identical or closely linked with the Alt4 locus (409,429)
|
|
TAM... >>> Xtam...
|
|
|
Tc
|
Color of tillers
|
|
Tc427
|
(363)
|
|
td
|
Disturbed tetrade formation
|
|
tg
|
Tulip growth habit
|
|
Thi
|
Thionin
|
|
ti
|
Tigrina
|
|
Tp
|
Transposition
|
|
Tpi
|
Triosephosphate isomerase
|
|
trnS
|
Coding for tRNASer (GCU)
|
|
Tr
|
Translocation breakpoint
|
|
Tw
|
Thousand grain weight (363, 425)
|
|
Tw125
|
Thousand grain weight (363, 425) on chromosome 5R
|
|
Tw225
|
Thousand grain weight (363, 425) on chromosome 7R
|
|
Tyr
|
Tyrosinase
|
|
Uba syn Xpsr860
|
|
|
ug
|
Production of unreduced gamtes in diploid rye (394); named by the author
|
|
V >>> Hg
|
|
|
va
|
Viridoalbina
|
|
vb >>> vi
|
Viridis
|
|
Vdac1 syn Xtav1961
|
|
|
Vdac2 syn Xtav1960
|
|
|
vi syn an
|
Viridis, virescent, anthocyaninless
|
|
vi1 >>> an1
|
|
|
Vrn >>> Sp
|
|
|
Vs >>> Ps
|
Violet seeds
|
|
w >>> wa 1
|
Waxless plant with waxy nodes
|
|
wa syn epr
|
|
|
wa1
|
Waxless plant
|
|
wg syn es
|
Waxless glume
|
|
WG... >>> Xwg...
|
|
|
wh
|
White
|
|
whg
|
White glume
|
|
Wms...
|
Resistance to wheat streak mosaic virus
|
|
Wsp...
|
Water-soluble proteins (412)
|
|
wx >>> wa1
|
Waxy endosperm (455)
|
|
xa
|
Xantha
|
|
Xabc...
|
cDNA clones of barley (439)
|
|
Xabc160
|
(439)
|
|
Xabc160u
|
(439)
|
|
Xabc161
|
(439)
|
|
Xabc310
|
(439)
|
|
Xabc310.1
|
(439)
|
|
Xabc454u
|
(439)
|
|
Xabc465
|
(439)
|
|
Xabg463
|
(439)
|
|
XAcl2
|
pLH/ACPII/1
|
|
XAdh
|
RFLP, DNA clone p3NTR, function: 3’untranslated region of Adh1A, copy number:1
|
|
XAdpg2
|
pSh2.25; ADP glucose pyrophosphorylase
|
|
Xalpha-Amy1
|
RFLP, cDNA clone of wheat gene alpha-Amy1 (AMY-46)
|
|
Xalpha-Amy2
|
RFLP, cDNA clone of wheat gene alpha-Amy2 (AMY 4848)
|
|
Xalpha-Amy3
|
RFLP, cDNA clone of wheat gene alpha-Amy3 (AMY 33)
|
|
Xapr...
|
Arbitrary primer for rye genome mapping, RAPD (299,355)
|
|
Xapr1.1
|
RAPD marker, primer GACTACGGGG, 1600 bp fragment (412)
|
|
Xapr1.2
|
RAPD marker, primer CCGAATTCCC, 1400 bp fragment (412)
|
|
Xapr1.3
|
RAPD marker, primer ACGCCCAGAC, 520 bp fragment (412)
|
|
Xapr1.4
|
RAPD marker, primer TGGATCCGC, 550 bp fragment (412)
|
|
Xapr1.5
|
RAPD marker, primer GCACGTAGAT, 950 bp fragment (412)
|
|
Xapr1.6
|
RAPD marker, primer ACTCACTACA, 850 bp fragment (412)
|
|
Xapr1.7
|
RAPD marker, primer ACTCACTACA, 1030 bp fragment (412)
|
|
Xapr1.8
|
RAPD marker, primer CAGCCTACCT, 500 bp fragment (355,412)
|
|
Xapr1.9
|
RAPD marker, primer GTAGCCGTCT, 370 bp fragment (355,412)
|
|
Xapr1.10
|
RAPD marker, primer GTAGCCGTCT, 750 bp fragment (355), ACTCACTACA, 750 bp fragment (,412)
|
|
Xapr1.11
|
RAPD marker, primer CTGCTGGGAC, 590 bp fragment (412)
|
|
Xapr1.12
|
RAPD marker, primer AACGAATGCC, 870 bp fragment (412)
|
|
Xapr1.13
|
RAPD marker, primer CGGCTGACTT, 900 bp fragment (412)
|
|
Xapr1.14
|
RAPD marker, primer CACAGCGATA, 700 bp fragment (412)
|
|
Xapr1.15
|
RAPD marker, primer GTGTACGGAT, 1100 bp fragment (412)
|
|
Xapr1.16
|
RAPD marker, primer CTCACCGTCC, 590 bp fragment (412)
|
|
Xapr1.17
|
RAPD marker, primer TCTCTGCGCT, 850 bp fragment (412)
|
|
Xapr1.18
|
RAPD marker, primer TGCCCGTCGT, 900 bp fragment (412)
|
|
Xapr1.19
|
RAPD marker, primer TCACAGACGC, 740 bp fragment (412)
|
|
Xapr1.20
|
RAPD marker, primer TCGCCAGAGT, 1000 bp fragment (412)
|
|
Xapr1.21
|
RAPD marker, primer TGCTCGGTTC, 1100 bp fragment (412)
|
|
Xapr2.1
|
RAPD marker, primer TGTCCAGCTT, 1200 bp fragment (412)
|
|
Xapr2.2
|
RAPD marker, primer TCGCCCCATT, 900 bp fragment (412)
|
|
Xapr2.3
|
RAPD marker, primer AGTTCGTCTG, 1000 bp fragment (412)
|
|
Xapr2.4
|
RAPD marker, primer GTCCACACGG, 400 bp fragment (412)
|
|
Xapr2.5
|
RAPD marker, primer CTCACCGTCC, 750 bp fragment (412)
|
|
Xapr2.6
|
RAPD marker, primer TGCGGCTGAG, 650 bp fragment (412)
|
|
Xapr2.7
|
RAPD marker, primer GCAACTACGT, 1200 bp fragment (412)
|
|
Xapr2.8
|
RAPD marker, primer CTCGAGGTAA, 1030 bp fragment (412)
|
|
Xapr2.9
|
RAPD marker, primer GAGGATCCCT, 570 bp fragment (412)
|
|
Xapr2.10
|
RAPD marker, primer TCCGACAAGA, 450 bp fragment (412)
|
|
Xapr2.11
|
RAPD marker, primer CACCATCCAA, 840 bp fragment (412)
|
|
Xapr2.12
|
RAPD marker, primer CTCACCGTCC, 1100 bp fragment (412)
|
|
Xapr2.13
|
RAPD marker, primer TGCCCTGCGT, 1200 bp fragment (412)
|
|
Xapr2.14
|
RAPD marker, primer TCGCCAGAGT, 1550 bp fragment (412)
|
|
Xapr2.15
|
RAPD marker, primer ACGCGCATGT, 950 bp fragment (412)
|
|
Xapr2.16
|
RAPD marker, primer TAGCGGCTAG, 480 bp fragment (412)
|
|
Xapr2.17
|
RAPD marker, primer TCTCTGCGCT, 400 bp fragment (412)
|
|
Xapr2.18
|
RAPD marker, primer CCGAGTCAAA, 490 bp fragment (412)
|
|
Xapr2.19
|
RAPD marker, primer GTGTAAGCCG, 1000 bp fragment (412
|
|
Xapr2.20
|
RAPD marker, primer GCACGTAGAT, 490 bp fragment (412)
|
|
Xapr2.21
|
RAPD marker, primer GAACTCCGCT, 900 bp fragment (412)
|
|
Xapr2.22
|
RAPD marker, primer TCGCCAGAGT,490 bp fragment (412)
|
|
Xapr2.23
|
RAPD marker, primer CGCGCACAAT, 960 bp fragment (412)
|
|
Xapr2.24
|
RAPD marker, primer GGTCGGAGAA, 650 bp fragment (412)
|
|
Xapr3.1
|
RAPD marker, primer CCCTACCGAC, 550 bp fragment (412)
|
|
Xapr3.2
|
RAPD marker, primer AACGCGTTCT, 2000 bp fragment (412)
|
|
Xapr3.3
|
RAPD marker, primer CGTACGGATA, 2000 bp fragment (412)
|
|
Xapr3.4
|
RAPD marker, primer ACGGTACCAG, 850 bp fragment (412)
|
|
Xapr3.5
|
RAPD marker, primer CGTCGGAGAA, 539 bp fragment (412)
|
|
Xapr3.6
|
RAPD marker, primer ATGGATCCGC, 870 bp fragment (412)
|
|
Xapr3.7
|
RAPD marker, primer CAAACGTCGC, 700 bp fragment (412)
|
|
Xapr3.8
|
RAPD marker, primer CACAGCTGCG, 750 bp fragment (355,412)
|
|
Xapr3.9
|
RAPD marker, primer CACAGCGAAA |
